Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828016.1_cds_XP_016503278.1_16837
CDS Infomation

[gene=LOC107821354] [db_xref=GeneID:107821354] [protein=E3 ubiquitin-protein ligase TRAF7-like] [protein_id=XP_016503278.1] [location=complement(31925..33238)] [gbkey=CDS]
Sequence

ATGAAATTCCGATCTTGGCTTGCAACTTGCTCCTCCTCCGTCACCACTGCCGACGACCAG
CCTATTCCACCACCAAAACTCCCATTCTCCGACGATGCAAGCAGCTTATTTTCCGACATA
ACCAACAGTTCACCTATATCAGTAATTTCTCAAGAAACAAACAATTCCCTTAGTAGTTTA
CAAAGCAACCTCTCCCTTTTAACCTTACCTTCTGTCCCTTCTCTCCAAAATCTCTCTCCC
GGTACCTTAAACCTCGTAATCTCAGCTCGCTGCCTCAATTCTCTTAATCCCCGAAACGCC
CTTGTCACTTTCCTAGCTGTCCACAACAATCTCCTTTACGCTGCTTCCTCCAATGAAATC
AACGTCTTTGAACTCACGAATTTCACGCTTATCGATACTTTCAATGGCAAAGACCCTTCA
AGCGGCTCGATAAAATCAGTGGCTTTTCTTAATGGTAAAATTTTCACAGCCCATCAGGAC
TGTAAAATCCGGGTGTGGAAACAGACACCAGTTAAGCAGCATAAACTAATTGCGATACTC
CCAACACTTGAAGACCGGTTACGCAGATTCGTTTTCCCTAGCAGCTATACAAATGTAAGA
AGACATAAGAAGAAGCTATGGATCGAACATCACGATGCTGTTTCTGGATTAGCAGTAAAT
GAAAATTTAATGTGCTCTATTTCGTGGGATAGGTCTTTGAAAATTTGGAGCGGGTCAGAT
TTACGGTGCAGTGAATCAATTAGAGCACATGATGATGCCATAAACGCTGTTGTGGTAGGT
AAAGATGGGACTATTTTTACAGGTTCTGCTGATAAACGGATTCGAGTTTGGGGTAAACCA
AAAGGGGAGAAAAAATCAAAATCAAAACATGGGCTGATTGCTACATTAGAAAAACATAAA
TCGGCGGTGAATGCATTAGCATTAAGCTCTGATTGTTCTGTTCTATTTTCGGGCGCTTGT
GATCGGTCGATATTGGTATGGGAAAGGGAAGACAGTGCTAATTACATGGTGGTTACTGGT
GCATTGAGAGGTCATACGAAAGCGATATTATGTTTGATCAACGTATCTGATTTGTTGTTC
AGTGGATCGGCGGATCGGACGGTAAGGATTTGGACACGTGGGATTGAAGGACAGTTCTGT
TGTTTAACGGTTCTGGATGGTCATCGGACACCGGTGAGGTCATTGGTGGCGGCGGCGGAA
ACCAGTGAATCTGACGGTGGTTCTGTGAAGTTGTTTAGTGGAAGCTTTGACGGAGAAATT
AAAGTGTGGCAAATTGGGGTTTCTAGTTCAAGTGGCAGTCCTTTGAAATCATAA

Peptide Sequence

PEP ID

XP_016503278.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase TRAF7-like [Nicotiana tabacum]
Sequence

MKFRSWLATCSSSVTTADDQPIPPPKLPFSDDASSLFSDITNSSPISVISQETNNSLSSL
QSNLSLLTLPSVPSLQNLSPGTLNLVISARCLNSLNPRNALVTFLAVHNNLLYAASSNEI
NVFELTNFTLIDTFNGKDPSSGSIKSVAFLNGKIFTAHQDCKIRVWKQTPVKQHKLIAIL
PTLEDRLRRFVFPSSYTNVRRHKKKLWIEHHDAVSGLAVNENLMCSISWDRSLKIWSGSD
LRCSESIRAHDDAINAVVVGKDGTIFTGSADKRIRVWGKPKGEKKSKSKHGLIATLEKHK
SAVNALALSSDCSVLFSGACDRSILVWEREDSANYMVVTGALRGHTKAILCLINVSDLLF
SGSADRTVRIWTRGIEGQFCCLTVLDGHRTPVRSLVAAAETSESDGGSVKLFSGSFDGEI
KVWQIGVSSSSGSPLKS

Transcript Sequence

Gene sequence data has not been registered.